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About Entrez

Entrez Genome
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Genome Project
Genome sequence

Microbial
Genome Projects
PDB neighbors

Genomic BLAST
Microbial
Eukaryotic

Archaea
Chromosome
Plasmid
DraftAssembly

Bacteria
Chromosome
Plasmid
DraftAssembly

Eukaryota
Chromosome
Plasmid
Organelles

Viruses
Phages

Viroids

All Plasmids

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The Genome database provides views for a variety of genomes, complete chromosomes, sequence maps with contigs, and integrated genetic and physical maps. The database is organized in six major organism groups: Archaea, Bacteria, Eukaryotae, Viruses, Viroids, and Plasmids and includes complete chromosomes, organelles and plasmids as well as draft genome assemblies.

Microbial Genomes Resources presents public data from prokaryotic genome sequencing projects. The sequence collection contains data from finished genomes as well as draft assemblies. The analytical tools include specialized BLAST with microbial genomes, newly developed Concise Protein BLAST, annotation tools and many more.

Identification of SNPs in two Salmonella enterica serovar Enteritidis PT13a pathotypes that point to epidemiological trends.

There has been an increasing number of infections leading to salmonellosis by Salmonella enterica serovar Enteritidis in the United States. Using preliminary genomic sequence data of Salmonella enterica subsp. I serovar Enteritidis PT4 from the Sanger Institute as a starting point, researchers at The Egg Safety and Quality Research Unit (ESQRU) of the U. S. Department of Agriculture have identified a set of potential SNPs that point to differences between two PT13a pathotypes that may be relevant in distinguishing phenotypic traits that may have epidemiological consequences. See more ...

Influenza Virus Resource presents data obtained from the NIAID Influenza Genome Sequencing Project as well as from GenBank, combined with tools for flu sequence analysis and annotation. In addition, it provides links to other resources that contain flu sequences, publications and general information about flu viruses.

Related resources

Entrez Genome Project complete and incomplete large-scale sequencing projects
Entrez Protein Clusters a collection of related protein sequences
Eukaryotic
genome projects and sequences
Genomes of Bacillus anthracis
reference genome and related sequences
Influenza Virus Resource
sequence database and analyses
Microbial Genomes
reference sequences and resources
Organelle
reference sequences and tools
Plant Genomes Central
major plant genome projects
SARS Coronavirus Resource
sequence data and analyses
Salmonella SNPs
SNP data in two Salmonella enterica pathotypes
Viruses
reference sequences and tools
WGS Projects
Whole Genome Shotgun sequencing

Tools and Analysis

gMap
comparative analysis of microbial genomes
Map Viewer
genome browser for eukaryotic genomes
TaxPlot
3-Way View of Genome Similarities
COGs
clusters of orthologous groups
BLAST
with completed and unfinished genomes

Major Sequencing Centers

Revised: March 31, 2008.

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